Indian
Institute of Technology Bombay from Oct 18-20, 2002 organized THE FIRST INDIAN
SYMPOSIUM OF THE PROTEIN SOCIETY on “Protein structure and function”. 250
scientists attended the meeting. There were 42 oral presentations, with about
half of them different parts of the world and other half from India. There was
strong student participation with 76 poster presentations spread over 2 days.
Dr. (Ms) Manju Sharma, Secretary, Department of Biotechnology, who has been
responsible for initiating and supporting several Biotechnology related
activities in India, gave the inaugural address. Dr Sharma emphasized the need
for strengthening the Protein Science activity in view of crucial role played
by them development of various technologies.
The
symposium had a high level of diversity in terms of topics covered but yet
maintained a focus. The technical
sessions began with Ramachandran lecture given by Harold Scheraga on ab initio
prediction of protein structure by global optimization of potential energy. The
five distinct themes covered were - de novo protein design, protein structure,
protein folding, proteins and diseased state, membrane channel proteins,
membrane-protein interaction and cytoskeleton organization dynamics and
diseased state. The Ramachandran lecture was followed by talks by P. Balaram on
use of conformationally controlled residues in design of protein mimics and Bob
Stroud, who spoke on the intricate glycerol channel. The next section on
Protein structure had talks by M. Vijayan on ligand specificity in lectins,
Shekhar Mande on chaperonins found in Mycobacterium, Dinakar Salunke spoke on
structural convergence in an antibody response. This was followed by two talks
on NMR of proteins with one by R.V. Hosur on plasticity and dynamics of
HIV-proteases and David Craik described conformation of disulfide-locked
circular protein toxins found in nature. The next session dealt with Protein
folding where in H. Roder talked about early intermediates in protein folding
and J. Udgaonkar on folding intermediates in barstar. A. Surolia talked on
legume lectins as paradigms for equilibrium folding studies of oligomeric
proteins and R. Varadarajan spoke on new approaches to the design of
temperature sensitive mutants of a globular protein from amino acid sequence.
The protein folding session concluded with an interesting talk by B.
Bhattacharyya on Chaperone like activity of Tubulin.
The
next section was devoted to Proteins, diseased state and drug design. Girish
Sahani gave the first talk on deciphering the molecular mechanism of the
extraordinarily stringent substrate specificity of the
streptokinase-plasminogen activator complex that had implications in the de
novo design of tailor-made proteases. The next three talk dealt with
protein aggregation. John E. Maggio spoke on folding and misfolding in
neurodegenerative disease: A-b amyloid, and Alzheimer's and E. Gazit spoke on the
mechanism of amyloid fibrils self-assembly, which had implications for the
design of fibrilization inhibitors. Eva -M. Mandelkow spoke on role of tau
protein in neurite outgrowth, axonal traffic, and Alzheimer neurodegeneration.
This was followed by a talk by Ch. Mohan Rao on a
crystallin: a small heat shock protein with chaperone activity and then G. M.
Anantharamiah on Peptide mimics of antiatherogenic apoliporpotein A-1 and E.
This was followed by a talk by R.M. Kini on development of a novel class of
anticoagulant peptides based on the structure of a snake venom prothrombin
activator. This session concluded with two of IIT Bombay alumnus, Rajesh S.
Gokhale who spoke on crosstalk between fatty acid synthases and polyketide
synthases in Mycobacterium tuberculosis and Partha Saha who spoke on
studies on two proteins from Leishmania donovani to search for unique
mechanism of cell cycle regulation in the parasite.
The membrane-channel protein section
began with an overview talk by J. P. Rosenbusch on problems and promises
associated with determination of structure of membrane-proteins at atomic
resolution. This was followed by
elegant structural details of transport mechanism across the periplasmic space
by Ben Luisi. This was followed by talks on soluble proteins that insert into
membranes under an impulse wherein William Cramer talked about Colicin-recptor
interaction and Anil Lala described models for insertion and translocation of
diphtheria toxin across membranes. Jean-Marie Ruysschaert then spoke on
conformational changes detected in multidrug transporters. S. Grissmer then
presented data on toxins and drugs modulating potassium channels whereas M.
Mathews described the chirameric potassium channels. Michael Blanton on The
Nicotinic Acetylcholine Receptor gave the last talk in this section where he
addressed questions relating to membrane-spanning domain being composed of
a bundle of a-helices or a mixture of a-helices and b-strands. The
membrane-protein section began with a talk by Stephen H. White who addressed in
detail how membranes shape protein structure. This was followed by a talk by
Ashish Arora on solution structure and dynamics of the Outer Membrane Protein A
transmembrane domain in detergent micelles by NMR. R. Nagaraj described a
series of membrane-active antimicrobial peptides and Satyajit Mayor talked on
the nano-scale structure of GPI-anchored protein containing rafts in living
cell. The last talk in this section by Musti J. Swamy dealt with interaction of
bovine seminal plasma protein, PDC-109 with lipid membranes.
The last section dealt with Cytoskeleton
organization dynamics and diseased state. Les Wilson opened the session with a
talk on Microtubule dynamics and the mechanisms of action of
microtubule-targeted antimitotic anticancer drugs, which was followed by a
lucid description of Structure of kinesin and interactions with microtubules by
E. Mandelkow. Amitabha Chattopadhyay
gave a talk on Protein Conformation and Dynamics using the Wavelength-Selective
Fluorescence Approach. Daniel L. Purich talked about Actoclampin: The Newly
Recognized ATP-dependent motor responsible for Cell Crawling. This was followed
by a talk by Mark M. Rasenick on Interaction between G proteins and the
Cytoskeleton and its implications for depression and the action of
anti-depressant drugs. Dulal Panda gave the last talk of the meeting on
antiproliferative mechanism of action of natural flavonoids that act by
perturbation of microtubule polymerization dynamics through tubulin binding.
The meeting thus covered various aspects of protein structure and function
ranging from de novo prediction to cellular function.