Speaker: Prof. Siddhartha S. Jana
School of Biological Sciences,
Indian Association for the Cultivation of Science,
Kolkata-700032
Title: "MYH genes regulation: Alternative splicing of pre-mRNA
and non-canonical binding of miRNA".
Day and Date: Monday, September 04, 2023
Time: 15.00 hrs.
Venue: Seminar room, room no. 350, Chemistry Department
(second floor, Annex)
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Abstract In this talk, I will try to provide evidence that alternative
splicing of pre-mRNA and non-canonical binding of microRNA (miRNA) can
regulate the function of MYH genes which encode heavy chains of nonmuscle
myosin II (NM II). First half of my talk will discuss a novel
alternatively spliced isoform of NM IIA, called NM IIA2, which is
generated by the inclusion of 21 amino acids near the actin binding region
(loop 2) of the head domain of heavy chain which is encoded by MYH9 gene.
Expression of NM IIA2 is found exclusively in the brain tissue, where it
reaches a maximum level at 24h during the circadian rhythm. The
actin-dependent Mg2+-ATPase activity and in vitro motility assays reveal
that NM IIA2 lacks its motor activities but localizes with actin filaments
in cells. Interestingly, NM IIA2 can also make heterofilaments with NM
IIA0 (non-inserted isoform of NM IIA) and can retard the in vitro motility
of NM IIA, when the two are mixed, suggesting the functional importance of
alternatively spliced isoform, NM IIA2, and its potential physiological
role in regulating NM IIA activity in the brain. Second half of my talk
will discuss that a group of microRNAs (mmu-miR-200a-5p, mmu-miR-532-3p,
mmu-miR-680 and mmu-miR-1901) can significantly repress the expression of
NMIIC (a paralog of NMIIA). Interestingly, these microRNAs have both
canonical and non-canonical binding sites at 3/UTR and CDS of NMIIC’s
heavy chain (HC) mRNA, encoded by MYH14 gene. Each of the miRNA
downregulates NMHC-IIC to a different degree as assessed by
dual-luciferase and immunoblot analyses. When we abolish the complementary
base pairing at canonical binding site, mmu-miR-532-3p can still bind at
non-canonical binding site and form Argonaute 2 (AGO2)-miRNA complex to
downregulate the expression of NMIIC. Together, these studies suggest that
MYH genes’ activity can be regulated by their alternative splicing and
abundance of miRNA targeting them.