Seminar by Dr. Subhankar Sahu (University of Strasbourg, France) on "Protein-based Sandwich Assay Coupled with Nanopore Direct RNA Sequencing Pipeline for dsRNA Sensing and EIDs Monitoring."

19 Dec 2025
Room no. 350, Chemistry Department Second floor, Annex

Speaker: Dr. Subhankar Sahu
Institut de Biologie Moléculaire des Plantes (IBMP),
CNRS, Université de Strasbourg, Strasbourg,
France

Title: "Protein-based Sandwich Assay Coupled with Nanopore
Direct RNA Sequencing Pipeline for dsRNA Sensing and
EIDs Monitoring."

Day and Date: Friday, December 19, 2025

Time: 11.30 am.

Venue: Room no. 350, Chemistry Department
Second floor, Annex

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Hosted by Prof. Ruchi Anand

Talk Title : "Protein-based Sandwich Assay Coupled with Nanopore Direct RNA Sequencing Pipeline for dsRNA Sensing and EIDs Monitoring."
Abstract
Abstract: Double-stranded RNA (dsRNA) is a universal pathogen-associated molecular pattern, and nearly all viruses produce dsRNA in their life cycle, making it a crucial biomarker for emerging infectious diseases (EIDs) detection, particularly those caused by unknown viruses. Surprisingly, dsRNA-centered approaches for virus sensing are hard to come by and remain underrepresented in the current literature. This talk discusses a sensitive, scalable, and selective dsRNA biosensing assay by structurally engineering a viral protein as a bioreceptor. The assay is integrated with Oxford nanopore direct RNA sequencing strategy for qualitative analysis of dsRNA, and viral species identification via reference database mapping, making it one of the very first dsRNA-based virus monitoring platforms, especially useful for EIDs (unknown pathogenic threat).